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Package Function
Base
summary is a generic function used to produce result summaries of the results of various model fitting functions.
The function invokes particular methods which depend on the class of the object (ie first argument).
x = rnorm(50,5,4)
xSummary <- summary(x)
xSummary
Min. 1st Qu. Median Mean 3rd Qu. Max.
-4.963 3.434 5.706 5.800 8.119 16.140
For a data frame, you got to see the following for each variable:
- Missaing values (NA's)
- mean
- median
- 1st and 3rd quartile
Export it:
exportFile <- file("C:/temp/Myfile.tsv",open="w")
write.table(xSummary, sep="\t")
close(exportFile)
Psych
psych package
Total
# Load packages
library(psych)
# You can save the content of this function
mySummaryTable = describe(myData)
By
describeBy
The describeBy function reports basic summary statistics by a grouping variable.
Useful if:
- the grouping variable is some experimental variable (ie dependent variable)
- the data are to be aggregated for plotting.
Partly a wrapper of the describe function.
An alternative function statsBy returns a list of means, n, and standard deviations for each group.
statsBy
statsBy is an alternative function an describeBy that returns a list of:
- n,
for each group.
Dplyr
See also: R - Dplyr (Data Frame Operations) and the summarize function.